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GCC2019 has ended
The 2019 Galaxy Community Conference (GCC2019) was held in Freiburg, Germany, 1-8 July.  There was one day of training, three days of mixed meeting and training, and then two to four days of CollaborationFest.  The meeting featured joint & parallel sessions; invited, accepted, and lightning talks; poster and demo sessions; birds-of-a-feather meetups; social events; and training sessions every day.

Thanks to everyone who helped make GCC2019 a success!
avatar for Ajit Singh

Ajit Singh

Rothamsted Research
Senior Bioinformatics Engineer
Harpenden, UK
Websitehttps://rothamsted.ac.uk/our-people/ajit-singh
Senior Bioinformatics Engineer and Galaxy SysAdmin at Rothamsted Research, Harpenden, UK.
Tuesday, July 2
 

08:00 CEST

Conference Desk Open Konzerthaus

09:10 CEST

Invited Talk: Evolution of X chromosome recognition during Drosophila Dosage Compensation GreeceClaudia Isabelle Keller Valsecchi

09:40 CEST

Galaxy Australia – inside the national vision of a data commons GreeceGareth Price

10:00 CEST

A Machine Learning Tool Suite for Galaxy GreeceJeremy Goecks

10:20 CEST

An Update on Galaxy Workflows: More Accessible, Expressive, Robust, and Scalable GreeceJohn Chilton • Marius van den Beek

11:00 CEST

GalaxyCloudRunner: Streamlined Cloud Bursting for Galaxy GreeceNuwan Goonasekera

11:07 CEST

Laniakea: A Galaxy-on-demand Provider Platform Through Cloud Technologies GreeceMarco Antonio Tangaro

11:27 CEST

Enabling Single Sign-On for Multiple Galaxy Instances GreeceEnis Afgan

11:34 CEST

How – And How not – to manage successful local Galaxies deployments GreecePhilip Mabon

11:54 CEST

Building a Pulsar Network across Europe GreeceGianmauro Cuccuru

13:20 CEST

16S analysis with mothur BelgiumSaskia Hiltemann How to create a Galaxy Tool GreeceJohn Chilton • Nicola Soranzo

14:50 CEST

Poster 22 A: Laniakea: A Galaxy-on-demand Provider Platform Through Cloud Technologies KonzerthausMarco Antonio Tangaro Poster 37 A: Galaxy Genome Annotation Project: Easier Genome Annotation Using Galaxy and GMOD Tools KonzerthausAnthony Bretaudeau Poster 40 A: Aequatus.js: a plugin to visualise gene trees in Galaxy KonzerthausAnil S. Thanki Poster 43 A: Galaxy and Training: 2019 updates from the Galaxy Training Network KonzerthausBérénice Batut Poster 49 A: Mining hot topics in stem cells by combining text mining and scientometrics KonzerthausZhengyin Hu • Xiaomei Wang

15:25 CEST

Demo 04 A: GalaxyCloudRunner: Streamlined Cloud Bursting for Galaxy FranceNuwan Goonasekera

15:50 CEST

Scripting Galaxy through BioBlend GreeceMarius van den Beek • Nicola Soranzo

17:20 CEST

Group Picture Konzerthaus

17:30 CEST

Using Galaxy for Creation and Execution of Text Mining Workflows in the OpenMinTeD platform GermanyDimitrios Galanis

17:50 CEST

To Better Benefit from Shared Tasks in Biomedical Text Mining GermanyMouhamadou Ba

17:57 CEST

The LAPPS Grid/Galaxy Platform for Mining Scientific Publications GermanyAlexandru Mahmoud

18:17 CEST

Infrastructure for Healthier Living: Galaxy at Quadram Institute Bioscience GermanyThanh Le Viet

18:24 CEST

How Usable is Galaxy? A Usability Evaluation of Galaxy GermanyNgoc-Huy Truong
 
Wednesday, July 3
 

09:20 CEST

Galaxy on Kubernetes: where we are and future challenges GreecePablo Moreno

09:40 CEST

A Minimal Docker Image for Galaxy GreeceThat Other Person

09:47 CEST

CVMFS-CSI for Galaxy: Efficient Access to Read-only Data in Kubernetes GreeceAlexandru Mahmoud

09:54 CEST

gxadmin: usegalaxy.* administration wisdom GreeceHelena Rasche

11:00 CEST

Aequatus.js: a plugin to visualise gene trees in Galaxy GermanyAnil S. Thanki

11:20 CEST

Visual Refinement of Genome Annotations with Apollo in a Community Environment GermanyNathan Dunn

11:27 CEST

Architectural and Systems Improvements to G-OnRamp, a Collaborative Eukaryotic Genome Annotation Platform GermanyLuke Sargent

11:34 CEST

ChiRA: an integrated framework for Chimeric Read Annotation GermanyPavankumar Videm

11:54 CEST

Creating a Universe of Galaxies: The UseGalaxy.* Project GreeceNate Coraor Training experience on “Data analysis and interpretation for clinical genomics” using Galaxy GermanyGianmauro Cuccuru

12:00 CEST

Lunch Konzerthaus

13:20 CEST

Train the Galaxy Trainer SpainSaskia Hiltemann • Helena Rasche • Simon Gladman • Bérénice Batut • Anna Syme

14:50 CEST

Poster 20 B: Testing and Visualizing the State of Galaxy Tools and Workflows KonzerthausMartin Čech Poster 23 B: Galaxy on Kubernetes: where we are and future challenges KonzerthausPablo Moreno Poster 26 B: RealTimeTools: Integrating, Customizing, and Accessing UI-based Tools in Galaxy KonzerthausDaniel Blankenberg Poster 35 B: NanoGalaxy: A Galaxy toolkit and workflows for long-read sequencing KonzerthausWillem de Koning Poster 38 B: Visual Refinement of Genome Annotations with Apollo in a Community Environment KonzerthausNathan Dunn Poster 53 B: UseGalaxy.eu: Community, Training, Infrastructure, and Users KonzerthausHelena Rasche

15:25 CEST

Demo 08 B: Tool Prediction in Galaxy Workflows using Deep Learning SpainAnup Kumar

15:50 CEST

Making your open source project awesome SpainBérénice Batut • Yo Yehudi Visualisation development in Galaxy FranceAnup Kumar • Aysam Guerler • Jeremy Goecks

17:30 CEST

Invited Talk: Galaxy Community Update GreeceAnton Nekrutenko • James Taylor

18:00 CEST

Tool Prediction in Galaxy Workflows using Deep Learning GreeceAnup Kumar

19:30 CEST

Conference Dinner Offsite
 
Thursday, July 4
 

10:18 CEST

Use Galaxy, Right Now! GermanyHelena Rasche • Dave Clements

10:25 CEST

Galaxy Publication Library GermanyDave Clements

11:47 CEST

NanoGalaxy: A Galaxy toolkit and workflows for long-read sequencing GermanyWillem de Koning

12:00 CEST

Lunch Konzerthaus

13:20 CEST

Machine Learning with Galaxy - Predict age from DNA-methylation dataset GermanyAlireza Khanteymoori • Anup Kumar

14:50 CEST

Poster 24: Galaxy In A Large Scale Production Environment KonzerthausSascha Kastens Poster 36 C: EDAM: the ontology of bioinformatics operations, types of data, topics, and data formats (2019 update) KonzerthausMatúš Kalas Poster 51 C: How Usable is Galaxy? A Usability Evaluation of Galaxy KonzerthausNgoc-Huy Truong

15:00 CEST

Demo 10 C: Interactive Galaxy Visualizations for Multi-omics Research SpainRay Sajulga Demo 12 C: Visual Refinement of Genome Annotations with Apollo in a Community Environment FranceNathan Dunn Demo 14 C: Galaxy on Kubernetes BelgiumThat Other Person • Enis Afgan • Alexandru Mahmoud • Nuwan Goonasekera

15:25 CEST

Demo 11 C: NanoGalaxy: A Galaxy toolkit and workflows for long-read sequencing SpainWillem de Koning

18:00 CEST

Galaxy and Training: 2019 updates from the Galaxy Training Network GreeceBérénice Batut

18:20 CEST

Closing GreeceDave Clements • Bjorn Gruning • Anika Erxleben
 
Friday, July 5
 

09:00 CEST

CollaborationFest: Core Konzerthaus