Name: Introduction to Galaxy Administration III
Start: 2019-07-01T15:30:00+0200
End: 2019-07-01T17:30:00+0200

The 2019 Galaxy Community Conference (GCC2019) was held in Freiburg, Germany, 1-8 July. There was one day of training, three days of mixed meeting and training, and then two to four days of CollaborationFest. The meeting featured joint & parallel sessions; invited, accepted, and lightning talks; poster and demo sessions; birds-of-a-feather meetups; social events; and training sessions every day.

Thanks to everyone who helped make GCC2019 a success!

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Introduction to Galaxy Administration III

This training session has a Gitter channel where preparation instructions are posted, and for class discussion, last minute links, and more.

https://gitter.im/dagobah-training/Lobby

After attending this and the previous 2 sessions you will be able to interconnect and troubleshoot a darn good Galaxy instance. Topics include:

exploring the Galaxy job configuration file
connecting Galaxy to compute clusters
polishing Galaxy on uWSGI application server
instance monitoring using Grafana
shared data management with CVMFS
when things go wrong: Galaxy server troubleshooting tips & examples

Prerequisites

Knowledge and comfort with the Unix/Linux command line interface and a text editor: If you don't know what cd, mv, rm, mkdir, chmod, grep and so on can do then you will struggle
Knowledge of topics from or attendance at session I and session II.

Speakers

GCC2019

Enis Afgan

Simon Gladman

Martin Čech

John Chilton

Nate Coraor

Helena Rasche

Attendees (42)