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GCC2019 has ended
The 2019 Galaxy Community Conference (GCC2019) was held in Freiburg, Germany, 1-8 July.  There was one day of training, three days of mixed meeting and training, and then two to four days of CollaborationFest.  The meeting featured joint & parallel sessions; invited, accepted, and lightning talks; poster and demo sessions; birds-of-a-feather meetups; social events; and training sessions every day.

Thanks to everyone who helped make GCC2019 a success!
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B. Talks: Outside the Genome & Community [clear filter]
Thursday, July 4
 

08:59 CEST

Session 13:Outside the Genome & Community Track
Talks (invited, accepted and lightning) about diverse applications of Galaxy and community resources.
Moderators
avatar for Bérénice Batut

Bérénice Batut

Post-doc, University of Freiburg

Thursday July 4, 2019 08:59 - 10:30 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13

09:00 CEST

Invited Talk: Data visualisation by citizen science participants: the case of birds and bats monitoring schemes and Galaxy-E
→ Abstract, Slides

Yves Bas 1, Romain Lorrilière 1, Yvan Le Bras 1

  1. French National Museum of Natural History
Speakers
YB

Yves Bas

French National Museum of Natural History
avatar for Romain Lorrillière

Romain Lorrillière

French National Museum of Natural History

Abstract Galaxy201907 pdf
S13OTG 1 GCC2019 Bas Lorrilliere LeBras pdf
Thursday July 4, 2019 09:00 - 09:30 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13

09:30 CEST

Galaxy-Bricks a Tool for Data Literacy and Scientific Approach Education in the Context of Citizen Science
→ Abstract, Slides

Simon Bénateau 1, Sébastien Turpin 1, Yvan Le Bras 2

  1. MNHN, CESCO, UMR 7204, 43 rue Buffon, 75005 Paris
  2. MNHN, PatriNat, UMS 2006, station marine de Concarneau, 29900 Concarneau
Speakers
avatar for Simon Bénateau

Simon Bénateau

Paris, French National Museum of Natural History

GCC2019 abstract 20 pdf
S13OTG 2 Benateau GCC2019 pdf
Thursday July 4, 2019 09:30 - 09:37 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13

09:37 CEST

CITIZEN SCIENCE PROJECT in ECOLOGY with the GALAXY-E PLATFORM
→ Abstract, Slides

Yguel Benjamin 1, Amosse Alan 1, Lebras Yvan 2

  1. Centre d'Ecologie et des Sciences de la Conservation (CESCO), Muséum national d'Histoire naturelle, Centre National de la Recherche Scientifique, Sorbonne Université, CP 135, 57 rue Cuvier 75005 Paris, France
  2. UMS 2006 Patrimoine naturel (PatriNat), Muséum national d'Histoire naturelle, Station marine de Concarneau, Place de la Croix, 29900 Concarneau.
Speakers
BY

GCC2019 abstract 21 pdf
S13OTG 3 Final pres GCC pdf
Thursday July 4, 2019 09:37 - 09:44 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13

09:44 CEST

Galaxy-E project: 2019 news
→ Abstract, Slides

Yvan Le Bras 1, Alan Amossé 1, Simon Bénateau 1, Benjamin Yguel 1

  1. French museum of natural history
Speakers
avatar for Yvan Le Bras

Yvan Le Bras

Research engineer, French National Museum of Natural History

GCC2019 abstract 66 pdf
S13OTG 4 GCC2019 Freiburg Galaxy E pdf
Thursday July 4, 2019 09:44 - 10:04 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13

10:04 CEST

The ChemicalToolBox - Computational Chemistry in Galaxy
→ Abstract, Slides

Simon Bray, Björn Grüning Freiburg Galaxy Team, Bioinformatics Group, University of Freiburg
Speakers
avatar for Simon Bray

Simon Bray

University of Freiburg
I'm a member of the European Galaxy Team at the University of Freiburg, interested in computational chemistry, molecular dynamics, and the use of workflow management systems for virtual screening.

GCC2019 abstract 41 pdf
S13OTG 5 simonbray pdf
Thursday July 4, 2019 10:04 - 10:11 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13

10:11 CEST

Improved Reference Data Management in Galaxy: Towards a Plant Data Analysis Platform
→ Abstract, Slides

Ignacio Eguinoa 1,2, Frederik Coppens 1,2

  1. Ghent University, Department of Plant Biotechnology and Bioinformatics, 9052 Ghent, Belgium
  2. VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
Speakers
IE

Ignacio Eguinoa

ELIXIR Belgium - VIB Center for Plant Systems Biology

GCC2019 abstract 17 pdf
S13OTG 6 slides Ignacio Eguinoa pdf
Thursday July 4, 2019 10:11 - 10:18 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13

10:18 CEST

Use Galaxy, Right Now!
→ Abstract, Slides

Dave Clements 1, Helena Rasche 2, Martin Čech 3, Dannon Baker 1, and the 100s of Galaxy Community Members who support these platforms 4

  1. Galaxy Project, Johns Hopkins University, Baltimore, Maryland, United States
  2. Galaxy Project Europe, University of Freiburg, Freiburg, Germany
  3. Galaxy Project, Penn State University, State College, Pennsylvania, United States
  4. Galaxy Platform Directory, https://galaxyproject.org/use/
Speakers
avatar for Helena Rasche
avatar for Dave Clements

Dave Clements

Training and Outreach Coordinator, Galaxy Project, Johns Hopkins University

GCC2019 abstract 11 pdf
S13OTG 7 Use Galaxy, Right Now! pdf
Thursday July 4, 2019 10:18 - 10:25 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13

10:25 CEST

Galaxy Publication Library
→ Abstract, Slides

Dave Clements 1, Dannon Baker 1, and 35,000+ Authors of Galaxy Related Publications 2

  1. Galaxy Project, Johns Hopkins University
  2. Galaxy Publication Library, https://www.zotero.org/groups/1732893/galaxy
Speakers
avatar for Dave Clements

Dave Clements

Training and Outreach Coordinator, Galaxy Project, Johns Hopkins University

GCC2019 clements library pdf
S13OTG 8 Galaxy Publication Library pdf
Thursday July 4, 2019 10:25 - 10:32 CEST
Germany
  B. Talks: Outside the Genome & Community, Session 13
 
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University of Freiburg Compute Center
  • A. Training
  • B. Talks: Admin / Dev
  • B. Talks: Epigenetics
  • B. Talks: General
  • B. Talks: Outside the Genome & Community
  • B. Talks: Proteomics / Metabolomics
  • B. Talks: Transcriptomics / Genomics
  • B. Talks: Variation / Metagenomics / Assembly
  • C. Posters / Demos / Sponsors
  • D. Break / Social / Networking / Meal
  • E. Help
  • F. CollaborationFest: Core
  • G. CollaborationFest: Encore