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GCC2019 has ended
The 2019 Galaxy Community Conference (GCC2019) was held in Freiburg, Germany, 1-8 July.  There was one day of training, three days of mixed meeting and training, and then two to four days of CollaborationFest.  The meeting featured joint & parallel sessions; invited, accepted, and lightning talks; poster and demo sessions; birds-of-a-feather meetups; social events; and training sessions every day.

Thanks to everyone who helped make GCC2019 a success!
avatar for Mo Heydarian

Mo Heydarian

Galaxy Project, Johns Hopkins University
Monday, July 1
 

12:00 CEST

Lunch Konzerthaus

18:00 CEST

Genome Annotation BoF OffsiteNathan Dunn • Helena Rasche
 
Tuesday, July 2
 

09:10 CEST

Invited Talk: Evolution of X chromosome recognition during Drosophila Dosage Compensation GreeceClaudia Isabelle Keller Valsecchi

09:40 CEST

Galaxy Australia – inside the national vision of a data commons GreeceGareth Price

10:00 CEST

A Machine Learning Tool Suite for Galaxy GreeceJeremy Goecks

10:20 CEST

An Update on Galaxy Workflows: More Accessible, Expressive, Robust, and Scalable GreeceJohn Chilton • Marius van den Beek

11:00 CEST

GalaxyCloudRunner: Streamlined Cloud Bursting for Galaxy GreeceNuwan Goonasekera

11:07 CEST

Laniakea: A Galaxy-on-demand Provider Platform Through Cloud Technologies GreeceMarco Antonio Tangaro

11:27 CEST

Enabling Single Sign-On for Multiple Galaxy Instances GreeceEnis Afgan

11:34 CEST

How – And How not – to manage successful local Galaxies deployments GreecePhilip Mabon

11:54 CEST

Building a Pulsar Network across Europe GreeceGianmauro Cuccuru

13:20 CEST

Variant calling I - from sequenced reads to variant lists SpainWolfgang Maier

15:50 CEST

Metatranscriptomics and multi-omics functional microbiome analysis BelgiumTimothy J. Griffin • Bérénice Batut • Ray Sajulga • Pratik Jagtap

17:30 CEST

HiCExplorer 3: A toolbox for Hi-C data analysis GreeceJoachim Wolff

17:57 CEST

Analysis and visualization of the human cardiac myocyte epigenome using Galaxy GreeceRalf Gilsbach

19:00 CEST

The Galaxy Training Network BoF! OffsiteSaskia Hiltemann • Bérénice Batut • Helena Rasche
 
Wednesday, July 3
 

09:00 CEST

Containerizing Galaxy server as a Singularity application on HPC clusters for GenAP GreeceDavid Morais

09:20 CEST

Galaxy on Kubernetes: where we are and future challenges GreecePablo Moreno

09:40 CEST

A Minimal Docker Image for Galaxy GreeceThat Other Person

09:47 CEST

CVMFS-CSI for Galaxy: Efficient Access to Read-only Data in Kubernetes GreeceAlexandru Mahmoud

09:54 CEST

gxadmin: usegalaxy.* administration wisdom GreeceHelena Rasche

10:10 CEST

Improving Transcriptome Analysis with Molecular Indices and Galaxy GermanyBrad Langhorst

10:17 CEST

Transposon Insertion Sequencing Analysis in Galaxy GermanyDelphine Lariviere

11:00 CEST

Working Effectively with Remote Data in Galaxy - A Progress Report GreeceJohn Chilton

11:07 CEST

Testing and Visualizing the State of Galaxy Tools and Workflows GreeceMartin Čech

11:27 CEST

Setting up a Galaxy Platform in a HPC Infrastructure for Genomics Implementation into Diagnosis Routines for a Health Reference Center GreeceMiguel Juliá

11:34 CEST

RealTimeTools: Integrating, Customizing, and Accessing UI-based Tools in Galaxy GreeceDaniel Blankenberg

11:54 CEST

Creating a Universe of Galaxies: The UseGalaxy.* Project GreeceNate Coraor

12:15 CEST

BoF: Galactic Visualisation! ItalySaskia Hiltemann • Helena Rasche • Anil S. Thanki EOSC-Life roadmap BOF SpainJean-Karim Heriche

13:20 CEST

Train the Galaxy Trainer SpainSaskia Hiltemann • Helena Rasche • Simon Gladman • Bérénice Batut • Anna Syme

17:30 CEST

Invited Talk: Galaxy Community Update GreeceAnton Nekrutenko • James Taylor

18:00 CEST

Tool Prediction in Galaxy Workflows using Deep Learning GreeceAnup Kumar

18:07 CEST

Street Science Community: make science tangible & accessible by bringing it to the “street” with open science workshops GreeceTeresa Müller
 
Thursday, July 4
 

09:00 CEST

Invited Talk: Data visualisation by citizen science participants: the case of birds and bats monitoring schemes and Galaxy-E GermanyYves Bas • Romain Lorrillière

09:20 CEST

Interactive Galaxy Visualizations for Multi-omics Research GreeceRay Sajulga

10:18 CEST

Use Galaxy, Right Now! GermanyHelena Rasche • Dave Clements

10:25 CEST

Galaxy Publication Library GermanyDave Clements

10:59 CEST

Session 14: Proteomics & Metabolomics GreecePratik Jagtap

11:00 CEST

The IRIDA Platform for Microbial Genomics GermanyAaron Petkau

11:20 CEST

Combat-tb Workbench, A Customizable Platform For Variant Discovery And Annotation, Phylogeny Construction And Variant Prioritisation GermanyZiphozakhe Mashologu

11:27 CEST

High throughput HIV next generation sequence analysis in Galaxy GermanyDave Bouvier

11:47 CEST

NanoGalaxy: A Galaxy toolkit and workflows for long-read sequencing GermanyWillem de Koning

12:15 CEST

Galaxy containers BoF FranceEnis Afgan • Bjorn Gruning • Marius van den Beek • Nuwan Goonasekera • Pablo Moreno

13:20 CEST

Assembly, annotation and analysis of bacterial genomes ItalyDelphine Lariviere • Anna Syme

15:50 CEST

Genomic assembly and data analysis in Galaxy with Nanopore ONT long read sequencing GreeceWillem de Koning • Saskia Hiltemann • Milad Miladi

17:30 CEST

Invited Talk: UseGalaxy: Elucidating chromatin biology of mouse cardiomyocytes GreeceStephan Nothjunge

18:00 CEST

Galaxy and Training: 2019 updates from the Galaxy Training Network GreeceBérénice Batut

18:20 CEST

Closing GreeceDave Clements • Bjorn Gruning • Anika Erxleben
 
Friday, July 5
 

09:00 CEST

CollaborationFest: Core Konzerthaus
 
Saturday, July 6
 

09:00 CEST

CollaborationFest: Core Konzerthaus
 
Sunday, July 7
 

09:00 CEST

CollaborationFest: Encore University of Freiburg Compute Center
 
Monday, July 8
 

09:00 CEST

CollaborationFest: Encore University of Freiburg Compute Center