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GCC2019 has ended
The 2019 Galaxy Community Conference (GCC2019) was held in Freiburg, Germany, 1-8 July.  There was one day of training, three days of mixed meeting and training, and then two to four days of CollaborationFest.  The meeting featured joint & parallel sessions; invited, accepted, and lightning talks; poster and demo sessions; birds-of-a-feather meetups; social events; and training sessions every day.

Thanks to everyone who helped make GCC2019 a success!
avatar for Mouhamadou Ba

Mouhamadou Ba

MaIAGE, INRA
Paris Area, France
INRA
Tuesday, July 2
 

08:59 CEST

Session 1: Opening Plenary GreeceBjorn Gruning

09:40 CEST

Galaxy Australia – inside the national vision of a data commons GreeceGareth Price

10:00 CEST

A Machine Learning Tool Suite for Galaxy GreeceJeremy Goecks

10:20 CEST

An Update on Galaxy Workflows: More Accessible, Expressive, Robust, and Scalable GreeceJohn Chilton • Marius van den Beek

10:59 CEST

Session 2: Outside the Genome & Community Track GermanyYvan Le Bras

11:34 CEST

How – And How not – to manage successful local Galaxies deployments GreecePhilip Mabon

13:20 CEST

How to create a Galaxy Tool GreeceJohn Chilton • Nicola Soranzo

14:50 CEST

Session 4: Posters, Demos, and Sponsors Konzerthaus

15:50 CEST

Machine Learning with Galaxy - Predict age from RNA-seq dataset GermanyAlireza Khanteymoori • Jeremy Goecks • Anup Kumar Scripting Galaxy through BioBlend GreeceMarius van den Beek • Nicola Soranzo

17:20 CEST

Group Picture Konzerthaus

17:29 CEST

Session 6: Outside the Genome & Community Track GermanyAnne Fouilloux

17:30 CEST

Using Galaxy for Creation and Execution of Text Mining Workflows in the OpenMinTeD platform GermanyDimitrios Galanis

17:50 CEST

To Better Benefit from Shared Tasks in Biomedical Text Mining GermanyMouhamadou Ba

17:57 CEST

The LAPPS Grid/Galaxy Platform for Mining Scientific Publications GermanyAlexandru Mahmoud

18:17 CEST

Infrastructure for Healthier Living: Galaxy at Quadram Institute Bioscience GermanyThanh Le Viet

18:24 CEST

How Usable is Galaxy? A Usability Evaluation of Galaxy GermanyNgoc-Huy Truong

19:00 CEST

The Freiburg City Tour BoF!FULL Offsite
 
Wednesday, July 3
 

09:00 CEST

Containerizing Galaxy server as a Singularity application on HPC clusters for GenAP GreeceDavid Morais

09:20 CEST

Galaxy on Kubernetes: where we are and future challenges GreecePablo Moreno

09:40 CEST

A Minimal Docker Image for Galaxy GreeceThat Other Person

09:54 CEST

gxadmin: usegalaxy.* administration wisdom GreeceHelena Rasche

11:00 CEST

Working Effectively with Remote Data in Galaxy - A Progress Report GreeceJohn Chilton Aequatus.js: a plugin to visualise gene trees in Galaxy GermanyAnil S. Thanki

11:07 CEST

Testing and Visualizing the State of Galaxy Tools and Workflows GreeceMartin Čech

11:34 CEST

RealTimeTools: Integrating, Customizing, and Accessing UI-based Tools in Galaxy GreeceDaniel Blankenberg

12:15 CEST

EOSC-Life roadmap BOF SpainJean-Karim Heriche

13:19 CEST

Session 9: Training Konzerthaus

13:20 CEST

Galaxy Code Architecture GreeceJohn Chilton • Nate Coraor Train the Galaxy Trainer SpainSaskia Hiltemann • Helena Rasche • Simon Gladman • Bérénice Batut • Anna Syme

14:50 CEST

Poster 20 B: Testing and Visualizing the State of Galaxy Tools and Workflows KonzerthausMartin Čech Poster 23 B: Galaxy on Kubernetes: where we are and future challenges KonzerthausPablo Moreno Poster 26 B: RealTimeTools: Integrating, Customizing, and Accessing UI-based Tools in Galaxy KonzerthausDaniel Blankenberg Poster 29 B: ARIAWeb: a new web service for automated NMR structure calculation with ARIA KonzerthausFabien Mareuil Poster 44 B: A brief overview on how bilille is using Galaxy for sharing knowledge, computational resources & tools. KonzerthausLoïc Couderc Poster 53 B: UseGalaxy.eu: Community, Training, Infrastructure, and Users KonzerthausHelena Rasche

15:25 CEST

Demo 08 B: Tool Prediction in Galaxy Workflows using Deep Learning SpainAnup Kumar

15:50 CEST

Beyond the Intro: Further Adventures in Using Galaxy ItalyMo Heydarian • Jennifer Hillman-Jackson Making your open source project awesome SpainBérénice Batut • Yo Yehudi Running Galaxy on Kubernetes GreecePablo Moreno • That Other Person • Enis Afgan • Nuwan Goonasekera • Alexandru Mahmoud

17:30 CEST

Invited Talk: Galaxy Community Update GreeceAnton Nekrutenko • James Taylor

18:00 CEST

Tool Prediction in Galaxy Workflows using Deep Learning GreeceAnup Kumar

18:07 CEST

Street Science Community: make science tangible & accessible by bringing it to the “street” with open science workshops GreeceTeresa Müller
 
Thursday, July 4
 

09:00 CEST

Invited Talk: Data visualisation by citizen science participants: the case of birds and bats monitoring schemes and Galaxy-E GermanyYves Bas • Romain Lorrillière

09:20 CEST

Interactive Galaxy Visualizations for Multi-omics Research GreeceRay Sajulga

09:27 CEST

ProteoRE, a Galaxy-based platform for the annotation and the interpretation of proteomics data in biomedical research GreeceFlorence Combes

09:30 CEST

Galaxy-Bricks a Tool for Data Literacy and Scientific Approach Education in the Context of Citizen Science GermanySimon Bénateau

09:44 CEST

Galaxy-E project: 2019 news GermanyYvan Le Bras

10:18 CEST

Use Galaxy, Right Now! GermanyHelena Rasche • Dave Clements

10:25 CEST

Galaxy Publication Library GermanyDave Clements

11:00 CEST

The IRIDA Platform for Microbial Genomics GermanyAaron Petkau

13:20 CEST

CVMFS and Pulsar GreeceSimon Gladman • Nate Coraor • Gianmauro Cuccuru • Helena Rasche Import, handle, visualize and analyze biodiversity data in Galaxy SpainYvan Le Bras • Simon Bénateau Machine Learning with Galaxy - Predict age from DNA-methylation dataset GermanyAlireza Khanteymoori • Anup Kumar

14:50 CEST

Poster 36 C: EDAM: the ontology of bioinformatics operations, types of data, topics, and data formats (2019 update) KonzerthausMatúš Kalas

15:50 CEST

Handling integrated biological data using Python, Jupyter, and InterMine GermanyKevin Reierskog • Yo Yehudi

18:00 CEST

Galaxy and Training: 2019 updates from the Galaxy Training Network GreeceBérénice Batut