Sched.com Conference Mobile Apps
GCC2019
has ended
Create Your Own Event
GCC2019
-
Saved To
My Schedule
The 2019
Galaxy Community Conference (GCC2019)
was held in Freiburg, Germany, 1-8 July. There was
one day of training
,
three days of mixed meeting and training
, and then
two to four days of CollaborationFest
. The meeting featured joint & parallel sessions; invited, accepted, and lightning talks;
poster
and
demo
sessions;
birds-of-a-feather meetups
;
social events
; and training sessions every day.
Thanks to everyone who helped make GCC2019 a success!
Schedule
Simple
Expanded
Grid
By Venue
Speakers
Sponsors
Attendees
Info
Map
Search
or browse by date + venue
A. Training
All
Admin / Dev
Diverse Communities
Epigenetics
Introduction / General
Metagenomics / Assembly
Proteomics / Metabolomics
Transciptomics / Genome Variation
B. Talks: Admin / Dev
All
Session 2
Session 7
Session 8
B. Talks: Epigenetics
All
Session 6
B. Talks: General
B. Talks: Outside the Genome & Community
All
Session 13
Session 2
Session 6
B. Talks: Proteomics / Metabolomics
All
Session 13
Session 14
B. Talks: Transcriptomics / Genomics
All
Session 7
Session 8
B. Talks: Variation / Metagenomics / Assembly
All
Session 14
C. Posters / Demos / Sponsors
All
Demos
Posters
Sponsors
D. Break / Social / Networking / Meal
All
BoFs
Break
Demos
Meal
Sponsors
E. Help
F. CollaborationFest: Core
G. CollaborationFest: Encore
menu
Menu
Log in
Sign up
Schedule
Speakers
Sponsors
Attendees
Info
Map
Search
← Back
Philip Mabon
Public Health Agency of Canada
Senior Bioinformatician
Winnipeg,Canada
Monday
, July 1
09:00 CEST
Beer Decoded, Here and Now!
Italy
Nanopore Loading Zone!
Italy
Conference Desk Open
Konzerthaus
10:00 CEST
Introduction to Galaxy Administration I
Greece
Martin Čech • Enis Afgan • Simon Gladman • Marius van den Beek • John Chilton • Nate Coraor • Helena Rasche
12:00 CEST
Lunch
Konzerthaus
13:00 CEST
Introduction to Galaxy Administration II
Greece
Enis Afgan • Simon Gladman • Martin Čech • Marius van den Beek • John Chilton • Nate Coraor • Helena Rasche
15:00 CEST
Break
Konzerthaus
15:30 CEST
Analyzing Large / Complex Experimental Designs with Galaxy
Germany
Daniel Blankenberg • Marius van den Beek • Mo Heydarian • Jennifer Hillman-Jackson
Introduction to Galaxy Administration III
Greece
Enis Afgan • Simon Gladman • Martin Čech • John Chilton • Nate Coraor • Helena Rasche
18:00 CEST
Birds-of-a-Feather (BoFs), with Your Dinner!
Offsite
Genome Annotation BoF
Offsite
Nathan Dunn • Helena Rasche
Tuesday
, July 2
08:00 CEST
Conference Desk Open
Konzerthaus
08:59 CEST
Session 1: Opening Plenary
Greece
Bjorn Gruning
09:00 CEST
Welcome
Greece
Anika Erxleben • Bjorn Gruning
09:10 CEST
Invited Talk: Evolution of X chromosome recognition during Drosophila Dosage Compensation
Greece
Claudia Isabelle Keller Valsecchi
09:40 CEST
Galaxy Australia – inside the national vision of a data commons
Greece
Gareth Price
10:00 CEST
A Machine Learning Tool Suite for Galaxy
Greece
Jeremy Goecks
10:20 CEST
An Update on Galaxy Workflows: More Accessible, Expressive, Robust, and Scalable
Greece
John Chilton • Marius van den Beek
10:30 CEST
Break / Sponsors
Konzerthaus
10:59 CEST
Session 2: Administration & Development
Greece
Helena Rasche
11:00 CEST
GalaxyCloudRunner: Streamlined Cloud Bursting for Galaxy
Greece
Nuwan Goonasekera
11:07 CEST
Laniakea: A Galaxy-on-demand Provider Platform Through Cloud Technologies
Greece
Marco Antonio Tangaro
11:27 CEST
Enabling Single Sign-On for Multiple Galaxy Instances
Greece
Enis Afgan
11:34 CEST
How – And How not – to manage successful local Galaxies deployments
Greece
Philip Mabon
11:54 CEST
Building a Pulsar Network across Europe
Greece
Gianmauro Cuccuru
12:00 CEST
Lunch
Konzerthaus
12:15 CEST
BoF: Remote computation with Pulsar
France
Gianmauro Cuccuru
13:19 CEST
Session 3: Training
Konzerthaus
13:20 CEST
How to create a Galaxy Tool
Greece
John Chilton • Nicola Soranzo
14:50 CEST
Session 4: Posters, Demos, and Sponsors
Konzerthaus
15:25 CEST
Demo 04 A: GalaxyCloudRunner: Streamlined Cloud Bursting for Galaxy
France
Nuwan Goonasekera
15:49 CEST
Session 5: Training
Konzerthaus
15:50 CEST
Machine Learning with Galaxy - Predict age from RNA-seq dataset
Germany
Alireza Khanteymoori • Jeremy Goecks • Anup Kumar
17:29 CEST
Session 6: Outside the Genome & Community Track
Germany
Anne Fouilloux
17:30 CEST
Using Galaxy for Creation and Execution of Text Mining Workflows in the OpenMinTeD platform
Germany
Dimitrios Galanis
17:50 CEST
To Better Benefit from Shared Tasks in Biomedical Text Mining
Germany
Mouhamadou Ba
17:57 CEST
The LAPPS Grid/Galaxy Platform for Mining Scientific Publications
Germany
Alexandru Mahmoud
18:17 CEST
Infrastructure for Healthier Living: Galaxy at Quadram Institute Bioscience
Germany
Thanh Le Viet
18:24 CEST
How Usable is Galaxy? A Usability Evaluation of Galaxy
Germany
Ngoc-Huy Truong
19:00 CEST
The Freiburg City Tour BoF!
FULL
Offsite
Wednesday
, July 3
08:00 CEST
Conference Desk Open
Konzerthaus
08:59 CEST
Session 7: Administration & Development Track
Greece
Simon Gladman
09:00 CEST
Containerizing Galaxy server as a Singularity application on HPC clusters for GenAP
Greece
David Morais
09:20 CEST
Galaxy on Kubernetes: where we are and future challenges
Greece
Pablo Moreno
09:40 CEST
A Minimal Docker Image for Galaxy
Greece
That Other Person
09:47 CEST
CVMFS-CSI for Galaxy: Efficient Access to Read-only Data in Kubernetes
Greece
Alexandru Mahmoud
09:54 CEST
gxadmin: usegalaxy.* administration wisdom
Greece
Helena Rasche
10:14 CEST
Galaxy container for Hinxton Single Cell Interactive Analysis Portal (HiSciAP)
Greece
Jonathan Manning
10:30 CEST
Break / Sponsors
Konzerthaus
10:59 CEST
Session 8: Administration & Development Track
Greece
David Morais
11:00 CEST
Working Effectively with Remote Data in Galaxy - A Progress Report
Greece
John Chilton
11:07 CEST
Testing and Visualizing the State of Galaxy Tools and Workflows
Greece
Martin Čech
11:27 CEST
Setting up a Galaxy Platform in a HPC Infrastructure for Genomics Implementation into Diagnosis Routines for a Health Reference Center
Greece
Miguel Juliá
11:34 CEST
RealTimeTools: Integrating, Customizing, and Accessing UI-based Tools in Galaxy
Greece
Daniel Blankenberg
11:54 CEST
Creating a Universe of Galaxies: The UseGalaxy.* Project
Greece
Nate Coraor
12:00 CEST
Lunch
Konzerthaus
12:15 CEST
Arts & Crafts
Czechia
Saskia Hiltemann • Helena Rasche
Birds-of-a-Feather (BoFs), with Lunch
Konzerthaus
BoF: Galactic Visualisation!
Italy
Saskia Hiltemann • Helena Rasche • Anil S. Thanki
13:19 CEST
Session 9: Training
Konzerthaus
13:20 CEST
Galaxy Code Architecture
Greece
John Chilton • Nate Coraor
Train the Galaxy Trainer
Spain
Saskia Hiltemann • Helena Rasche • Simon Gladman • Bérénice Batut • Anna Syme
14:50 CEST
Session 10: Posters, Demos, and Sponsors
Konzerthaus
15:49 CEST
Session 11: Training
Konzerthaus
15:50 CEST
Running Galaxy on Kubernetes
Greece
Pablo Moreno • That Other Person • Enis Afgan • Nuwan Goonasekera • Alexandru Mahmoud
17:30 CEST
Invited Talk: Galaxy Community Update
Greece
Anton Nekrutenko • James Taylor
19:30 CEST
Conference Dinner
Offsite
Thursday
, July 4
08:00 CEST
Conference Desk Open
Konzerthaus
08:59 CEST
Session 13: Proteomics & Metabolomics & Late Breaking Track
Greece
Melanie Föll
09:00 CEST
Invited Talk: Data visualisation by citizen science participants: the case of birds and bats monitoring schemes and Galaxy-E
Germany
Yves Bas • Romain Lorrillière
09:44 CEST
Galaxy-E project: 2019 news
Germany
Yvan Le Bras
10:04 CEST
The ChemicalToolBox - Computational Chemistry in Galaxy
Germany
Simon Bray
10:18 CEST
Use Galaxy, Right Now!
Germany
Helena Rasche • Dave Clements
10:30 CEST
Break / Sponsors
Konzerthaus
10:59 CEST
Session 14: Variation, Metagenomics & Assembly Track
Germany
Saskia Hiltemann
11:00 CEST
The IRIDA Platform for Microbial Genomics
Germany
Aaron Petkau
11:20 CEST
Combat-tb Workbench, A Customizable Platform For Variant Discovery And Annotation, Phylogeny Construction And Variant Prioritisation
Germany
Ziphozakhe Mashologu
11:27 CEST
High throughput HIV next generation sequence analysis in Galaxy
Germany
Dave Bouvier
11:47 CEST
NanoGalaxy: A Galaxy toolkit and workflows for long-read sequencing
Germany
Willem de Koning
12:00 CEST
Lunch
Konzerthaus
12:15 CEST
Arts & Crafts
Czechia
Saskia Hiltemann • Helena Rasche
Birds-of-a-Feather (BoFs), with Lunch
Konzerthaus
Galaxy containers BoF
France
Enis Afgan • Bjorn Gruning • Marius van den Beek • Nuwan Goonasekera • Pablo Moreno
13:20 CEST
15: Training Session
Konzerthaus
CVMFS and Pulsar
Greece
Simon Gladman • Nate Coraor • Gianmauro Cuccuru • Helena Rasche
14:50 CEST
16: Poster, Demo, and Sponsor Session
Konzerthaus
15:50 CEST
17: Training Session
Konzerthaus
Genomic assembly and data analysis in Galaxy with Nanopore ONT long read sequencing
Greece
Willem de Koning • Saskia Hiltemann • Milad Miladi
17:29 CEST
Session 18: Closing Plenary
Greece
Andrew Lonie
17:30 CEST
Invited Talk: UseGalaxy: Elucidating chromatin biology of mouse cardiomyocytes
Greece
Stephan Nothjunge
18:00 CEST
Galaxy and Training: 2019 updates from the Galaxy Training Network
Greece
Bérénice Batut
18:20 CEST
Closing
Greece
Dave Clements • Bjorn Gruning • Anika Erxleben
19:00 CEST
Intergalactic Utilities Commission (IUC) BoF
Offsite
Bjorn Gruning • Marius van den Beek • John Chilton • Nicola Soranzo • Saskia Hiltemann • Bérénice Batut • Daniel Blankenberg • Helena Rasche
Friday
, July 5
08:00 CEST
Conference Desk Open
Konzerthaus
09:00 CEST
CollaborationFest: Core
Konzerthaus
Timezone
GCC2019
Europe/Berlin
Filter By Date
GCC2019
Jul 1
-
8, 2019
July 2019
Sun
Mon
Tue
Wed
Thu
Fri
Sat
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
Filter By Venue
Freiburg, Germany
Sort schedule by Venue
Belgium
Czechia
France
Germany
Greece
Italy
Konzerthaus
Offsite
Spain
University of Freiburg Compute Center
Filter By Type
A. Training
All
Admin / Dev
Diverse Communities
Epigenetics
Introduction / General
Metagenomics / Assembly
Proteomics / Metabolomics
Transciptomics / Genome Variation
B. Talks: Admin / Dev
All
Session 2
Session 7
Session 8
B. Talks: Epigenetics
All
Session 6
B. Talks: General
B. Talks: Outside the Genome & Community
All
Session 13
Session 2
Session 6
B. Talks: Proteomics / Metabolomics
All
Session 13
Session 14
B. Talks: Transcriptomics / Genomics
All
Session 7
Session 8
B. Talks: Variation / Metagenomics / Assembly
All
Session 14
C. Posters / Demos / Sponsors
All
Demos
Posters
Sponsors
D. Break / Social / Networking / Meal
All
BoFs
Break
Demos
Meal
Sponsors
E. Help
F. CollaborationFest: Core
G. CollaborationFest: Encore
Recently Active Attendees
Jennifer Vaughn
R
rimmfus
Scott Edmunds
C
charleshicktw
Delphine Lariviere
Hans-Rudolf Hotz
Michael Faubladier
Frederic Sapet
More →