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GCC2019 has ended
The 2019 Galaxy Community Conference (GCC2019) was held in Freiburg, Germany, 1-8 July.  There was one day of training, three days of mixed meeting and training, and then two to four days of CollaborationFest.  The meeting featured joint & parallel sessions; invited, accepted, and lightning talks; poster and demo sessions; birds-of-a-feather meetups; social events; and training sessions every day.

Thanks to everyone who helped make GCC2019 a success!
PW

Prerana Wagle

CECAD Research Center
Bioinformaticien
Cologne
Websitebifacility.uni-koeln.de/
Monday, July 1
 

10:00 CEST

Introduction to Galaxy Administration I GreeceMartin Čech • Enis Afgan • Simon Gladman • Marius van den Beek • John Chilton • Nate Coraor • Helena Rasche

13:00 CEST

Introduction to Galaxy Administration II GreeceEnis Afgan • Simon Gladman • Martin Čech • Marius van den Beek • John Chilton • Nate Coraor • Helena Rasche

15:30 CEST

Introduction to Galaxy Administration III GreeceEnis Afgan • Simon Gladman • Martin Čech • John Chilton • Nate Coraor • Helena Rasche
 
Tuesday, July 2
 

09:10 CEST

Invited Talk: Evolution of X chromosome recognition during Drosophila Dosage Compensation GreeceClaudia Isabelle Keller Valsecchi

10:59 CEST

Session 2: Administration & Development GreeceHelena Rasche

13:20 CEST

Variant calling I - from sequenced reads to variant lists SpainWolfgang Maier

15:25 CEST

Demo 04 A: GalaxyCloudRunner: Streamlined Cloud Bursting for Galaxy FranceNuwan Goonasekera

15:50 CEST

Variant Calling II - causative variant discovery SpainWolfgang Maier

17:29 CEST

Session 6: Epigenetics Track & Late Breaking Lightning Talks GreeceDevon Ryan

17:30 CEST

HiCExplorer 3: A toolbox for Hi-C data analysis GreeceJoachim Wolff

17:50 CEST

Histone Deacetylases 1/2 In Microglia Function During Development And Neurodegeneration GreeceMaximilian Frosch

17:57 CEST

Analysis and visualization of the human cardiac myocyte epigenome using Galaxy GreeceRalf Gilsbach

18:17 CEST

Late Breaking Lightning Talks Greece

19:00 CEST

The Freiburg City Tour BoF! OffsiteFULL
 
Wednesday, July 3
 

08:59 CEST

Session 7: Administration & Development Track GreeceSimon Gladman

09:00 CEST

Containerizing Galaxy server as a Singularity application on HPC clusters for GenAP GreeceDavid Morais

09:20 CEST

Galaxy on Kubernetes: where we are and future challenges GreecePablo Moreno

09:40 CEST

A Minimal Docker Image for Galaxy GreeceThat Other Person

09:54 CEST

gxadmin: usegalaxy.* administration wisdom GreeceHelena Rasche

10:14 CEST

Galaxy container for Hinxton Single Cell Interactive Analysis Portal (HiSciAP) GreeceJonathan Manning

10:59 CEST

Session 8: Administration & Development Track GreeceDavid Morais

11:00 CEST

Working Effectively with Remote Data in Galaxy - A Progress Report GreeceJohn Chilton

11:27 CEST

Setting up a Galaxy Platform in a HPC Infrastructure for Genomics Implementation into Diagnosis Routines for a Health Reference Center GreeceMiguel Juliá

13:20 CEST

Galaxy Code Architecture GreeceJohn Chilton • Nate Coraor

15:50 CEST

Single cell RNA-seq analysis II GermanyAlex Ostrovsky • Mehmet Tekman

17:29 CEST

Session 12: Plenary GreeceFrederik Coppens

19:30 CEST

Conference Dinner Offsite
 
Thursday, July 4
 

08:59 CEST

Session 13: Proteomics & Metabolomics & Late Breaking Track GreeceMelanie Föll

09:00 CEST

Metaproteomics Powered By Metatranscriptomics: Towards a Multi-omic Functional Microbiome Analysis Within Galaxy GreecePratik Jagtap

09:20 CEST

Interactive Galaxy Visualizations for Multi-omics Research GreeceRay Sajulga

09:27 CEST

ProteoRE, a Galaxy-based platform for the annotation and the interpretation of proteomics data in biomedical research GreeceFlorence Combes

09:47 CEST

Galaxy Wrapper for MaxQuant GreeceDamian Glätzer

09:54 CEST

Application of Halogen Bonding in Molecular and Drug Design Facilitated by a Galaxy Webserver GreeceFrank M. Boeckler

10:14 CEST

Late Breaking Lightning Talks Greece

10:59 CEST

Session 14: Proteomics & Metabolomics GreecePratik Jagtap

11:00 CEST

Analysing and organising large-scale metabolome annotation studies with Django, ISA and Galaxy GreeceThomas N. Lawson

11:20 CEST

Reproducible and accessible analysis of spatially resolved proteomics and metabolomics data GreeceMelanie Föll

11:40 CEST

Workflow4Metabolomics: an international computing infrastructure for Metabolomics GreeceMélanie Petera • Romain Dallet • Gildas Le Corguillé

13:20 CEST

CVMFS and Pulsar GreeceSimon Gladman • Nate Coraor • Gianmauro Cuccuru • Helena Rasche