Sched.com Conference Mobile Apps
GCC2019
has ended
Create Your Own Event
Menu
Schedule
Speakers
Sponsors
Attendees
Info
Map
Search
Log in
Sign up
GCC2019
-
Saved To My Sched
The 2019
Galaxy Community Conference (GCC2019)
was held in Freiburg, Germany, 1-8 July. There was
one day of training
,
three days of mixed meeting and training
, and then
two to four days of CollaborationFest
. The meeting featured joint & parallel sessions; invited, accepted, and lightning talks;
poster
and
demo
sessions;
birds-of-a-feather meetups
;
social events
; and training sessions every day.
Thanks to everyone who helped make GCC2019 a success!
Schedule
Simple
Expanded
Grid
By Venue
Speakers
Sponsors
Attendees
Info
Map
Search
or browse by date + venue
A. Training
All
Admin / Dev
Diverse Communities
Epigenetics
Introduction / General
Metagenomics / Assembly
Proteomics / Metabolomics
Transciptomics / Genome Variation
B. Talks: Admin / Dev
All
Session 2
Session 7
Session 8
B. Talks: Epigenetics
All
Session 6
B. Talks: General
B. Talks: Outside the Genome & Community
All
Session 13
Session 2
Session 6
B. Talks: Proteomics / Metabolomics
All
Session 13
Session 14
B. Talks: Transcriptomics / Genomics
All
Session 7
Session 8
B. Talks: Variation / Metagenomics / Assembly
All
Session 14
C. Posters / Demos / Sponsors
All
Demos
Posters
Sponsors
D. Break / Social / Networking / Meal
All
BoFs
Break
Demos
Meal
Sponsors
E. Help
F. CollaborationFest: Core
G. CollaborationFest: Encore
Yvan Le Bras
French National Museum of Natural History
Research engineer
Concarneau, FRANCE
Monday
, July 1
09:00 CEST
Beer Decoded, Here and Now!
Italy
Nanopore Loading Zone!
Italy
10:00 CEST
Introduction to Using Galaxy (Galaxy 101)
Germany
Mo Heydarian • Jennifer Hillman-Jackson
13:00 CEST
Beyond the Intro: Further Adventures in Using Galaxy
Germany
Mo Heydarian • Jennifer Hillman-Jackson
15:30 CEST
Analyzing Large / Complex Experimental Designs with Galaxy
Germany
Dan Blankenberg • Marius van den Beek • Mo Heydarian • Jennifer Hillman-Jackson
18:00 CEST
The Computational Chemistry BoF
Offsite
Björn Grüning • Chris Barnett • Simon Bray
Tuesday
, July 2
08:00 CEST
Conference Desk Open
Konzerthaus
08:59 CEST
Session 1: Opening Plenary
Greece
Björn Grüning
09:00 CEST
Welcome
Greece
Anika Erxleben • Björn Grüning
09:10 CEST
Invited Talk: Evolution of X chromosome recognition during Drosophila Dosage Compensation
Greece
Claudia Isabelle Keller Valsecchi
09:40 CEST
Galaxy Australia – inside the national vision of a data commons
Greece
Gareth Price
10:00 CEST
A Machine Learning Tool Suite for Galaxy
Greece
Jeremy Goecks
10:20 CEST
An Update on Galaxy Workflows: More Accessible, Expressive, Robust, and Scalable
Greece
John Chilton • Marius van den Beek
10:30 CEST
Break / Sponsors
Konzerthaus
10:59 CEST
Session 2: Outside the Genome & Community Track
Germany
Yvan Le Bras
11:00 CEST
Galaxy Computational Chemistry
Germany
Chris Barnett
11:20 CEST
Climate Analysis with Galaxy
Germany
Anne Fouilloux
11:40 CEST
Galaxy Image Analysis: Web-based microscopy image analysis and cellular phenotyping
Germany
Thomas Wollmann
12:00 CEST
Lunch
Konzerthaus
12:15 CEST
BoF: Using Galaxy in automated production setups
Italy
Pablo Moreno
13:20 CEST
16S analysis with mothur
Belgium
Saskia Hiltemann
14:50 CEST
Session 4: Posters, Demos, and Sponsors
Konzerthaus
15:49 CEST
Session 5: Training
Konzerthaus
17:29 CEST
Session 6: Outside the Genome & Community Track
Germany
Anne Fouilloux
17:30 CEST
Using Galaxy for Creation and Execution of Text Mining Workflows in the OpenMinTeD platform
Germany
Dimitrios Galanis
17:50 CEST
To Better Benefit from Shared Tasks in Biomedical Text Mining
Germany
Mouhamadou Ba
17:57 CEST
The LAPPS Grid/Galaxy Platform for Mining Scientific Publications
Germany
Alexandru Mahmoud
18:17 CEST
Infrastructure for Healthier Living: Galaxy at Quadram Institute Bioscience
Germany
Thanh Le Viet
18:24 CEST
How Usable is Galaxy? A Usability Evaluation of Galaxy
Germany
Ngoc-Huy Truong
Wednesday
, July 3
09:00 CEST
Containerizing Galaxy server as a Singularity application on HPC clusters for GenAP
Greece
David Morais
09:30 CEST
Single-cell RNA Analysis in Galaxy on 10X Datasets
Germany
Mehmet Tekman
09:50 CEST
Biology-driven classification of Single-Cells RNAseq data in Galaxy
Germany
Christophe Antoniewski
09:54 CEST
gxadmin: usegalaxy.* administration wisdom
Greece
Helena Rasche
11:00 CEST
Working Effectively with Remote Data in Galaxy - A Progress Report
Greece
John Chilton
11:07 CEST
Testing and Visualizing the State of Galaxy Tools and Workflows
Greece
Martin Čech
11:27 CEST
Setting up a Galaxy Platform in a HPC Infrastructure for Genomics Implementation into Diagnosis Routines for a Health Reference Center
Greece
Miguel Juliá
11:34 CEST
RealTimeTools: Integrating, Customizing, and Accessing UI-based Tools in Galaxy
Greece
Dan Blankenberg
11:54 CEST
Creating a Universe of Galaxies: The UseGalaxy.* Project
Greece
Nate Coraor
12:15 CEST
BoF: Galactic Visualisation!
Italy
Saskia Hiltemann • Helena Rasche • Anil S. Thanki
13:20 CEST
Train the Galaxy Trainer
Spain
Saskia Hiltemann • Helena Rasche • Simon Gladman • Bérénice Batut • Anna Syme
15:50 CEST
Making your open source project awesome
Spain
Bérénice Batut • Yo Yehudi
17:30 CEST
Invited Talk: Galaxy Community Update
Greece
Anton Nekrutenko • James Taylor
18:00 CEST
Tool Prediction in Galaxy Workflows using Deep Learning
Greece
Anup Kumar
18:07 CEST
Street Science Community: make science tangible & accessible by bringing it to the “street” with open science workshops
Greece
Teresa Müller
19:30 CEST
Conference Dinner
Offsite
Thursday
, July 4
08:59 CEST
Session 13:Outside the Genome & Community Track
Germany
Bérénice Batut
09:00 CEST
Invited Talk: Data visualisation by citizen science participants: the case of birds and bats monitoring schemes and Galaxy-E
Germany
Yves Bas • Romain Lorrillière
09:30 CEST
Galaxy-Bricks a Tool for Data Literacy and Scientific Approach Education in the Context of Citizen Science
Germany
Simon Bénateau
09:37 CEST
CITIZEN SCIENCE PROJECT in ECOLOGY with the GALAXY-E PLATFORM
Germany
Benjamin Yguel
09:44 CEST
Galaxy-E project: 2019 news
Germany
Yvan Le Bras
10:04 CEST
The ChemicalToolBox - Computational Chemistry in Galaxy
Germany
Simon Bray
10:11 CEST
Improved Reference Data Management in Galaxy: Towards a Plant Data Analysis Platform
Germany
Ignacio Eguinoa
10:18 CEST
Use Galaxy, Right Now!
Germany
Helena Rasche • Dave Clements
10:25 CEST
Galaxy Publication Library
Germany
Dave Clements
11:00 CEST
Analysing and organising large-scale metabolome annotation studies with Django, ISA and Galaxy
Greece
Thomas N. Lawson
11:20 CEST
Reproducible and accessible analysis of spatially resolved proteomics and metabolomics data
Greece
Melanie Föll
11:40 CEST
Workflow4Metabolomics: an international computing infrastructure for Metabolomics
Greece
Mélanie Petera • Romain Dallet • Gildas Le Corguillé
13:20 CEST
Import, handle, visualize and analyze biodiversity data in Galaxy
Spain
Yvan Le Bras • Simon Bénateau
15:50 CEST
Population genomics with RADseq
Spain
Simon Bénateau • Yvan Le Bras
17:30 CEST
Invited Talk: UseGalaxy: Elucidating chromatin biology of mouse cardiomyocytes
Greece
Stephan Nothjunge
18:00 CEST
Galaxy and Training: 2019 updates from the Galaxy Training Network
Greece
Bérénice Batut
18:20 CEST
Closing
Greece
Dave Clements • Björn Grüning • Anika Erxleben
Friday
, July 5
09:00 CEST
CollaborationFest: Core
Konzerthaus
Saturday
, July 6
09:00 CEST
CollaborationFest: Core
Konzerthaus
My Moderators Sessions
Tuesday
, July 2
10:59 CEST
Session 2: Outside the Genome & Community Track
Germany
Yvan Le Bras
Timezone
GCC2019
Europe/Berlin
Filter By Date
GCC2019
Jul 1
-
8, 2019
July 2019
Sun
Mon
Tue
Wed
Thu
Fri
Sat
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
Filter By Venue
Freiburg, Germany
Sort schedule by Venue
Belgium
Czechia
France
Germany
Greece
Italy
Konzerthaus
Offsite
Spain
University of Freiburg Compute Center
Filter By Type
A. Training
All
Admin / Dev
Diverse Communities
Epigenetics
Introduction / General
Metagenomics / Assembly
Proteomics / Metabolomics
Transciptomics / Genome Variation
B. Talks: Admin / Dev
All
Session 2
Session 7
Session 8
B. Talks: Epigenetics
All
Session 6
B. Talks: General
B. Talks: Outside the Genome & Community
All
Session 13
Session 2
Session 6
B. Talks: Proteomics / Metabolomics
All
Session 13
Session 14
B. Talks: Transcriptomics / Genomics
All
Session 7
Session 8
B. Talks: Variation / Metagenomics / Assembly
All
Session 14
C. Posters / Demos / Sponsors
All
Demos
Posters
Sponsors
D. Break / Social / Networking / Meal
All
BoFs
Break
Demos
Meal
Sponsors
E. Help
F. CollaborationFest: Core
G. CollaborationFest: Encore
Recently Active Attendees
Dave Clements
R
rimmfus
R
rimmfuss
Enis Afgan
S
SoK
Shivani Sharma
Matúš Kalaš
Paul Wetter
More →