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The 2019
Galaxy Community Conference (GCC2019)
was held in Freiburg, Germany, 1-8 July. There was
one day of training
,
three days of mixed meeting and training
, and then
two to four days of CollaborationFest
. The meeting featured joint & parallel sessions; invited, accepted, and lightning talks;
poster
and
demo
sessions;
birds-of-a-feather meetups
;
social events
; and training sessions every day.
Thanks to everyone who helped make GCC2019 a success!
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A. Training
All
Admin / Dev
Diverse Communities
Epigenetics
Introduction / General
Metagenomics / Assembly
Proteomics / Metabolomics
Transciptomics / Genome Variation
B. Talks: Admin / Dev
All
Session 2
Session 7
Session 8
B. Talks: Epigenetics
All
Session 6
B. Talks: General
B. Talks: Outside the Genome & Community
All
Session 13
Session 2
Session 6
B. Talks: Proteomics / Metabolomics
All
Session 13
Session 14
B. Talks: Transcriptomics / Genomics
All
Session 7
Session 8
B. Talks: Variation / Metagenomics / Assembly
All
Session 14
C. Posters / Demos / Sponsors
All
Demos
Posters
Sponsors
D. Break / Social / Networking / Meal
All
BoFs
Break
Demos
Meal
Sponsors
E. Help
F. CollaborationFest: Core
G. CollaborationFest: Encore
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Saskia Hiltemann
Erasmus MC
The Hague Area, Netherlands
Metagenomics, Training materials, board games, CTF & security
My Friends
Monday
, July 1
09:00 CEST
Beer Decoded, Here and Now!
Italy
Nanopore Loading Zone!
Italy
10:00 CEST
Introduction to Galaxy Administration I
Greece
Martin Čech • Enis Afgan • Simon Gladman • Marius van den Beek • John Chilton • Nate Coraor • Helena Rasche
13:00 CEST
Introduction to Galaxy Administration II
Greece
Enis Afgan • Simon Gladman • Martin Čech • Marius van den Beek • John Chilton • Nate Coraor • Helena Rasche
15:30 CEST
Introduction to Galaxy Administration III
Greece
Enis Afgan • Simon Gladman • Martin Čech • John Chilton • Nate Coraor • Helena Rasche
18:00 CEST
Genome Annotation BoF
Offsite
Nathan Dunn • Helena Rasche
Tuesday
, July 2
08:59 CEST
Session 1: Opening Plenary
Greece
Bjorn Gruning
09:00 CEST
Welcome
Greece
Anika Erxleben • Bjorn Gruning
09:10 CEST
Invited Talk: Evolution of X chromosome recognition during Drosophila Dosage Compensation
Greece
Claudia Isabelle Keller Valsecchi
09:40 CEST
Galaxy Australia – inside the national vision of a data commons
Greece
Gareth Price
10:00 CEST
A Machine Learning Tool Suite for Galaxy
Greece
Jeremy Goecks
10:20 CEST
An Update on Galaxy Workflows: More Accessible, Expressive, Robust, and Scalable
Greece
John Chilton • Marius van den Beek
10:30 CEST
Break / Sponsors
Konzerthaus
10:59 CEST
Session 2: Administration & Development
Greece
Helena Rasche
11:00 CEST
GalaxyCloudRunner: Streamlined Cloud Bursting for Galaxy
Greece
Nuwan Goonasekera
11:07 CEST
Laniakea: A Galaxy-on-demand Provider Platform Through Cloud Technologies
Greece
Marco Antonio Tangaro
11:27 CEST
Enabling Single Sign-On for Multiple Galaxy Instances
Greece
Enis Afgan
11:34 CEST
How – And How not – to manage successful local Galaxies deployments
Greece
Philip Mabon
11:54 CEST
Building a Pulsar Network across Europe
Greece
Gianmauro Cuccuru
12:00 CEST
Lunch
Konzerthaus
12:15 CEST
Arts & Crafts
Czechia
Saskia Hiltemann • Helena Rasche
13:20 CEST
16S analysis with mothur
Belgium
Saskia Hiltemann
15:50 CEST
Metatranscriptomics and multi-omics functional microbiome analysis
Belgium
Timothy J. Griffin • Bérénice Batut • Ray Sajulga • Pratik Jagtap
17:20 CEST
Group Picture
Konzerthaus
19:00 CEST
The Galaxy Training Network BoF!
Offsite
Saskia Hiltemann • Bérénice Batut • Helena Rasche
Wednesday
, July 3
15:50 CEST
Making your open source project awesome
Spain
Bérénice Batut • Yo Yehudi
17:29 CEST
Session 12: Plenary
Greece
Frederik Coppens
17:30 CEST
Invited Talk: Galaxy Community Update
Greece
Anton Nekrutenko • James Taylor
18:00 CEST
Tool Prediction in Galaxy Workflows using Deep Learning
Greece
Anup Kumar
18:07 CEST
Street Science Community: make science tangible & accessible by bringing it to the “street” with open science workshops
Greece
Teresa Müller
19:30 CEST
Conference Dinner
Offsite
Thursday
, July 4
17:29 CEST
Session 18: Closing Plenary
Greece
Andrew Lonie
17:30 CEST
Invited Talk: UseGalaxy: Elucidating chromatin biology of mouse cardiomyocytes
Greece
Stephan Nothjunge
18:00 CEST
Galaxy and Training: 2019 updates from the Galaxy Training Network
Greece
Bérénice Batut
18:20 CEST
Closing
Greece
Dave Clements • Bjorn Gruning • Anika Erxleben
19:00 CEST
Intergalactic Utilities Commission (IUC) BoF
Offsite
Bjorn Gruning • Marius van den Beek • John Chilton • Nicola Soranzo • Saskia Hiltemann • Bérénice Batut • Daniel Blankenberg • Helena Rasche
Friday
, July 5
09:00 CEST
CollaborationFest: Core
Konzerthaus
Saturday
, July 6
09:00 CEST
CollaborationFest: Core
Konzerthaus
Sunday
, July 7
09:00 CEST
CollaborationFest: Encore
University of Freiburg Compute Center
Monday
, July 8
09:00 CEST
CollaborationFest: Encore
University of Freiburg Compute Center
My Moderators Sessions
Wednesday
, July 3
12:15 CEST
BoF: Galactic Visualisation!
Italy
Saskia Hiltemann • Helena Rasche • Anil S. Thanki
Thursday
, July 4
10:59 CEST
Session 14: Variation, Metagenomics & Assembly Track
Germany
Saskia Hiltemann
Timezone
GCC2019
Europe/Berlin
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A. Training
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Admin / Dev
Diverse Communities
Epigenetics
Introduction / General
Metagenomics / Assembly
Proteomics / Metabolomics
Transciptomics / Genome Variation
B. Talks: Admin / Dev
All
Session 2
Session 7
Session 8
B. Talks: Epigenetics
All
Session 6
B. Talks: General
B. Talks: Outside the Genome & Community
All
Session 13
Session 2
Session 6
B. Talks: Proteomics / Metabolomics
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Session 13
Session 14
B. Talks: Transcriptomics / Genomics
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Session 7
Session 8
B. Talks: Variation / Metagenomics / Assembly
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Session 14
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D. Break / Social / Networking / Meal
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E. Help
F. CollaborationFest: Core
G. CollaborationFest: Encore
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